Full Link:
STRINGSTRING
Solyc04g016370.2.1 Solyc04g016370.2.1 Solyc06g062350.2.1 Solyc06g062350.2.1 Solyc03g032070.2.1 Solyc03g032070.2.1 Solyc09g089660.2.1 Solyc09g089660.2.1 Solyc06g007480.2.1 Solyc06g007480.2.1 Solyc11g008500.1.1 Solyc11g008500.1.1 Solyc12g037980.1.1 Solyc12g037980.1.1 Solyc06g043170.2.1 Solyc06g043170.2.1 Solyc11g069370.1.1 Solyc11g069370.1.1 Solyc03g063220.1.1 Solyc03g063220.1.1 Solyc01g087500.2.1 Solyc01g087500.2.1
"Solyc06g043170.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g043170.2.1Uncharacterized protein (716 aa)    
Predicted Functional Partners:
Solyc06g007480.2.1
Uncharacterized protein (124 aa)
       
  0.979
Solyc04g016370.2.1
Uncharacterized protein (1539 aa)
       
  0.976
Solyc09g089660.2.1
Uncharacterized protein (539 aa)
     
  0.975
Solyc12g037980.1.1
Uncharacterized protein (435 aa)
     
0.964
Solyc11g069370.1.1
RuvB-like helicase (455 aa)
     
  0.952
Solyc06g062350.2.1
RuvB-like helicase (455 aa)
     
  0.952
Solyc03g032070.2.1
RuvB-like helicase (469 aa)
     
  0.934
Solyc03g063220.1.1
Uncharacterized protein (1608 aa)
       
  0.930
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
     
      0.911
Solyc11g008500.1.1
Uncharacterized protein (360 aa)
       
  0.802
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (1%)