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Solyc09g091100.2.1 Solyc09g091100.2.1 Solyc01g067290.2.1 Solyc01g067290.2.1 Solyc12g005300.1.1 Solyc12g005300.1.1 Solyc12g013710.1.1 Solyc12g013710.1.1 Solyc06g053980.2.1 Solyc06g053980.2.1 Solyc05g032660.2.1 Solyc05g032660.2.1 Solyc10g006900.2.1 Solyc10g006900.2.1 Solyc11g012850.1.1 Solyc11g012850.1.1 Solyc07g024000.2.1 Solyc07g024000.2.1 POR2 POR2 Solyc06g060310.2.1 Solyc06g060310.2.1
"Solyc06g053980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g053980.2.1Uncharacterized protein (312 aa)    
Predicted Functional Partners:
Solyc07g024000.2.1
Uncharacterized protein (484 aa)
         
  0.932
Solyc05g032660.2.1
Uncharacterized protein (346 aa)
         
  0.904
Solyc09g091100.2.1
Uncharacterized protein (459 aa)
         
  0.902
Solyc12g013710.1.1
Light dependent NADH-protochlorophyllide oxidoreductase 1 (397 aa)
         
  0.901
Solyc10g006900.2.1
Light dependent NADH-protochlorophyllide oxidoreductase 3 (395 aa)
         
  0.901
POR2
Light dependent NADH-protochlorophyllide oxidoreductase 2 (399 aa)
         
  0.901
Solyc11g012850.1.1
Uncharacterized protein (535 aa)
         
  0.901
Solyc06g060310.2.1
Uncharacterized protein (535 aa)
         
  0.901
Solyc01g067290.2.1
Uncharacterized protein (420 aa)
         
    0.900
Solyc12g005300.1.1
Uncharacterized protein (340 aa)
         
0.807
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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