Groups of genes that are frequently observed in each other's genomic neighborhood.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein (838 aa)
Predicted Functional Partners:
Uncharacterized protein (762 aa)
Uncharacterized protein (776 aa)
MADS-box protein 5 ; Probable transcription factor active in inflorescence development and floral organogenesis (241 aa)
Uncharacterized protein (583 aa)
Uncharacterized protein (568 aa)
Uncharacterized protein (580 aa)
Uncharacterized protein (571 aa)
Floral homeotic protein DEFICIENS (228 aa)
TDR6 protein (225 aa)
Auxin response factor 3 ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (747 aa)