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Solyc01g096020.2.1 Solyc01g096020.2.1 Solyc10g009420.2.1 Solyc10g009420.2.1 Solyc06g051980.2.1 Solyc06g051980.2.1 Solyc09g010830.2.1 Solyc09g010830.2.1 Solyc10g084760.1.1 Solyc10g084760.1.1 TSI-1 TSI-1 Solyc01g006190.2.1 Solyc01g006190.2.1 Solyc03g083270.2.1 Solyc03g083270.2.1 JERF1 JERF1 Solyc03g082820.2.1 Solyc03g082820.2.1 NAC1 NAC1
"JERF1" - Transcription factor JERF1 in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JERF1Transcription factor JERF1 (372 aa)    
Predicted Functional Partners:
TSI-1
TSI-1 protein (160 aa)
           
  0.693
Solyc03g082820.2.1
Uncharacterized protein (294 aa)
           
  0.483
Solyc10g084760.1.1
Uncharacterized protein (2043 aa)
           
  0.447
Solyc09g010830.2.1
Uncharacterized protein (1973 aa)
           
  0.447
Solyc10g009420.2.1
E3 ubiquitin-protein ligase ; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (316 aa)
       
 
  0.426
Solyc06g051980.2.1
E3 ubiquitin-protein ligase ; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (315 aa)
       
 
  0.426
Solyc03g083270.2.1
E3 ubiquitin-protein ligase ; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (313 aa)
       
 
  0.426
Solyc01g096020.2.1
E3 ubiquitin-protein ligase ; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (333 aa)
       
 
  0.426
Solyc01g006190.2.1
E3 ubiquitin-protein ligase ; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (308 aa)
       
 
  0.426
NAC1
NAC domain protein; NAC domain protein 1 (301 aa)
           
  0.415
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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