Full Link:
close STRING Website Improvement Campaign
deny allow Over the next 24 hours, we are collecting usage information on the web-interface (learn more).   Do you allow anonymous tracking of your activity ?
STRINGSTRING
Solyc04g081070.2.1 Solyc04g081070.2.1 Solyc02g090890.2.1 Solyc02g090890.2.1 LOC543696 LOC543696 LOC543649 LOC543649 NCED2 NCED2 Solyc08g075480.2.1 Solyc08g075480.2.1
"LOC543649" - Chromoplast-specific lycopene beta-cyclase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543649Chromoplast-specific lycopene beta-cyclase ; Involved in the synthesis of neoxanthin, the last product of carotenoid synthesis and a precursor of abscisic acid (498 aa)    
Predicted Functional Partners:
LOC543696
Violaxanthin de-epoxidase (478 aa)
         
  0.969
Solyc02g090890.2.1
Zeaxanthin epoxidase, chloroplastic ; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. Plays an important role in resistance to stresses, seed development and dormancy (669 aa)
         
  0.949
NCED2
9-cis-epoxycarotenoid dioxygenase 2 (581 aa)
         
  0.922
Solyc08g075480.2.1
Uncharacterized protein (577 aa)
         
    0.900
Solyc04g081070.2.1
Hop-interacting protein THI044 (819 aa)
           
  0.483
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (4%)