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Solyc12g042080.1.1 Solyc12g042080.1.1 RPS17 RPS17 Solyc12g039120.1.1 Solyc12g039120.1.1 RPS25 RPS25 Solyc11g021130.1.1 Solyc11g021130.1.1 Solyc11g006690.1.1 Solyc11g006690.1.1 Solyc02g069850.2.1 Solyc02g069850.2.1 Solyc06g084230.2.1 Solyc06g084230.2.1 rps3 rps3 Solyc06g073800.2.1 Solyc06g073800.2.1 Solyc06g073790.2.1 Solyc06g073790.2.1
"Solyc06g084230.2.1" - 40S ribosomal protein S24 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g084230.2.140S ribosomal protein S24 (133 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
     
  0.999
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
  0.999
Solyc06g073800.2.1
Uncharacterized protein (159 aa)
   
  0.998
Solyc06g073790.2.1
Annotation not available (159 aa)
   
  0.998
Solyc12g042080.1.1
Uncharacterized protein (159 aa)
   
  0.998
Solyc11g006690.1.1
Uncharacterized protein (144 aa)
   
  0.998
RPS17
40S ribosomal protein S17 (144 aa)
   
  0.998
RPS25
40S ribosomal protein S25 (108 aa)
     
  0.998
Solyc02g069850.2.1
Uncharacterized protein (108 aa)
     
  0.998
Solyc12g039120.1.1
Uncharacterized protein (143 aa)
     
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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