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STRINGSTRING
NIA NIA CycA3 CycA3 Solyc10g080080.1.1 Solyc10g080080.1.1 Glb1 Glb1 Solyc12g007170.1.1 Solyc12g007170.1.1 Solyc12g099440.1.1 Solyc12g099440.1.1 lin9 lin9 Solyc01g066620.2.1 Solyc01g066620.2.1 Solyc06g009160.2.1 Solyc06g009160.2.1 Solyc08g068390.2.1 Solyc08g068390.2.1 Solyc07g019670.2.1 Solyc07g019670.2.1
"Glb1" - Non-symbiotic hemoglobin class 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Glb1Non-symbiotic hemoglobin class 1 (152 aa)    
Predicted Functional Partners:
lin9
Invertase (652 aa)
           
  0.706
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
   
 
  0.564
Solyc12g099440.1.1
Uncharacterized protein (727 aa)
       
  0.522
Solyc12g007170.1.1
Uncharacterized protein (724 aa)
       
  0.522
Solyc08g068390.2.1
Uncharacterized protein (710 aa)
       
  0.522
Solyc07g019670.2.1
Uncharacterized protein (723 aa)
       
  0.522
Solyc06g009160.2.1
Uncharacterized protein (732 aa)
       
  0.522
Solyc01g066620.2.1
Uncharacterized protein (713 aa)
       
  0.522
CycA3
Cyclin A3 (378 aa)
           
  0.520
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
           
  0.495
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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