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Solyc10g075170.1.1 Solyc10g075170.1.1 gdh1 gdh1 Solyc08g068330.2.1 Solyc08g068330.2.1 Solyc03g094010.2.1 Solyc03g094010.2.1 Solyc12g014530.1.1 Solyc12g014530.1.1 Solyc08g041870.2.1 Solyc08g041870.2.1 Solyc07g055210.2.1 Solyc07g055210.2.1 Solyc06g033860.1.1 Solyc06g033860.1.1 Solyc03g083440.2.1 Solyc03g083440.2.1 Solyc01g068210.2.1 Solyc01g068210.2.1 Solyc07g041280.2.1 Solyc07g041280.2.1
"Solyc07g041280.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g041280.2.1Uncharacterized protein (362 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
       
  0.956
Solyc12g014530.1.1
L-aspartate oxidase ; Catalyzes the oxidation of L-aspartate to iminoaspartate (605 aa)
       
  0.912
gdh1
Glutamate dehydrogenase (411 aa)
   
 
  0.907
Solyc06g033860.1.1
Glutamate dehydrogenase (411 aa)
   
 
  0.907
Solyc03g094010.2.1
Glutamate dehydrogenase (411 aa)
   
 
  0.907
Solyc01g068210.2.1
Uncharacterized protein (634 aa)
   
 
  0.907
Solyc10g075170.1.1
Uncharacterized protein (368 aa)
         
  0.901
Solyc08g068330.2.1
Aspartate aminotransferase (452 aa)
         
  0.901
Solyc08g041870.2.1
Aspartate aminotransferase (462 aa)
         
  0.901
Solyc07g055210.2.1
Aspartate aminotransferase (425 aa)
         
  0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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