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STRINGSTRING
ETR1 ETR1 ACS2 ACS2 MADS-RIN MADS-RIN ACS1A ACS1A Never-ripe Never-ripe ACC4 ACC4 ACS3 ACS3 ACO1 ACO1 ACS6 ACS6 NIA NIA Solyc00g138060.2.1 Solyc00g138060.2.1
"ACO1" - 1-aminocyclopropane-1-carboxylate oxidase 1 in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO11-aminocyclopropane-1-carboxylate oxidase 1 (315 aa)    
Predicted Functional Partners:
ACS2
1-aminocyclopropane-1-carboxylate synthase 2 ; 1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes catalyze the conversion of S-adenosyl-L-methionine (SAM) into 1- aminocyclopropane-1-carboxylate (ACC), a direct precursor of ethylene (485 aa)
           
  0.837
ACC4
1-aminocyclopropane-1-carboxylate synthase 4 ; Catalyzes the formation of 1-aminocyclopropane-1- carboxylate, a direct precursor of ethylene in higher plants (476 aa)
           
  0.704
Never-ripe
Ethylene receptor; Ethylene receptor neverripe (635 aa)
           
  0.699
ACS1A
1-amino-cyclopropane-1-carboxylate synthase (483 aa)
           
  0.698
ACS3
1-aminocyclopropane-1-carboxylate synthase 3 ; Catalyzes the formation of 1-aminocyclopropane-1- carboxylate, a direct precursor of ethylene in higher plants (469 aa)
           
  0.695
MADS-RIN
MADS-box transcription factor; MADS-box transcription factor MADS-RIN (242 aa)
           
  0.642
ACS6
1-aminocyclopropane-1-carboxylate synthase (365 aa)
           
  0.511
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.489
Solyc00g138060.2.1
Annotation not available (311 aa)
   
          0.480
ETR1
Ethylene receptor 1 ; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (754 aa)
           
  0.470
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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