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Solyc07g039550.2.1 Solyc07g039550.2.1 Solyc12g035870.1.1 Solyc12g035870.1.1 Solyc09g090660.2.1 Solyc09g090660.2.1 Solyc01g110990.2.1 Solyc01g110990.2.1 Solyc09g011060.2.1 Solyc09g011060.2.1 Solyc10g051340.1.1 Solyc10g051340.1.1 Solyc05g018300.2.1 Solyc05g018300.2.1 Solyc07g054120.1.1 Solyc07g054120.1.1 Solyc07g062940.2.1 Solyc07g062940.2.1 Solyc01g109580.2.1 Solyc01g109580.2.1 CNOT1 CNOT1
"Solyc07g054120.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g054120.1.1Uncharacterized protein (611 aa)    
Predicted Functional Partners:
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
  0.965
Solyc09g011060.2.1
Clade IV lectin receptor kinase (832 aa)
     
  0.830
Solyc10g051340.1.1
Adenylyl cyclase-associated protein (471 aa)
       
  0.749
Solyc01g109580.2.1
Adenylyl cyclase-associated protein (472 aa)
       
  0.749
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
       
  0.742
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
       
  0.742
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.726
Solyc07g062940.2.1
Uncharacterized protein (716 aa)
     
 
  0.706
CNOT1
CCR4-NOT transcription complex subunit 1 (2411 aa)
     
  0.702
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
       
  0.694
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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