Full Link:
STRINGSTRING
unknown unknown Solyc11g072600.1.1 Solyc11g072600.1.1 VAHOX1 VAHOX1 NAM NAM KN1 KN1 T6 T6 PTS PTS lanceolate lanceolate Ls Ls wus wus SlERF52 SlERF52
"NAM" - Goblet in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAMGoblet; NO APICAL MERISTEM (352 aa)    
Predicted Functional Partners:
T6
Homeobox protein knotted-1-like LET6 ; May have a role to play in formative events in ovule and embryo morphogenesis. Probably binds to the DNA sequence 5’-TGAC- 3’ (354 aa)
           
  0.786
lanceolate
Lanceolate (400 aa)
           
  0.696
VAHOX1
Homeobox (323 aa)
           
  0.692
KN1
Homeotic protein knotted-1 ; Appears to be involved in meristem formation and in the regulation of leaf morphology. Misexpression makes the leaf more compound which is always associated with growth retardation and loss of apical dominance, resulting in dwarfed, bushy plants. Probably binds to the DNA sequence 5’-TGAC-3’ (355 aa)
           
  0.691
Ls
Lateral suppressor; Lateral suppressor protein (428 aa)
           
  0.575
wus
Protein WUSCHEL ; Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity (By similarity) (272 aa)
           
  0.568
PTS
PETROSELINUM (171 aa)
           
  0.519
unknown
Unknown protein (272 aa)
       
 
0.515
SlERF52
AP2/ERF transcription factor (162 aa)
           
  0.515
Solyc11g072600.1.1
AP2 transcription factor SlAP2d (481 aa)
           
  0.482
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (1%)