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TAPG4 TAPG4 Solyc12g019220.1.1 Solyc12g019220.1.1 Solyc12g019230.1.1 Solyc12g019230.1.1 Solyc01g087280.1.1 Solyc01g087280.1.1 TPG6 TPG6 TAPG5 TAPG5 PS-2 PS-2 Solyc07g065360.1.1 Solyc07g065360.1.1 Solyc09g098270.2.1 Solyc09g098270.2.1 PG2 PG2 Solyc04g025440.2.1 Solyc04g025440.2.1
"Solyc07g065360.1.1" - Pectinesterase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
Solyc07g065360.1.1Pectinesterase (356 aa)    
Predicted Functional Partners:
PG2
Polygalacturonase-2 ; Catalytic subunit of the polygalacturonase isozyme 1 and 2 (PG1 and PG2). Acts in concert with the pectinesterase, in the ripening process. Is involved in cell wall metabolism, specifically in polyuronide degradation. The depolymerization and solubilization of cell wall polyuronides mediated by PG2 during ripening seems to be limited by the beta subunit GP1, probably by recruiting PG2 to form PG1 (457 aa)
       
  0.639
Solyc09g098270.2.1
Uncharacterized protein (433 aa)
       
  0.639
Solyc04g025440.2.1
Uncharacterized protein (460 aa)
       
  0.639
PS-2
Dehiscence polygalacturonase (392 aa)
       
  0.639
Solyc01g087280.1.1
Uncharacterized protein (425 aa)
       
  0.639
TAPG4
Polygalacturonase 4 (387 aa)
       
  0.529
TAPG5
Polygalacturonase 5 (387 aa)
       
  0.529
TPG6
Polygalacturonase (395 aa)
       
  0.529
Solyc12g019230.1.1
Uncharacterized protein (391 aa)
       
  0.529
Solyc12g019220.1.1
Uncharacterized protein (395 aa)
       
  0.529
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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