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Solyc08g079680.2.1 Solyc08g079680.2.1 Solyc03g034170.2.1 Solyc03g034170.2.1 Solyc08g007580.2.1 Solyc08g007580.2.1 Solyc07g054820.2.1 Solyc07g054820.2.1 Solyc05g006440.2.1 Solyc05g006440.2.1 Solyc02g005200.2.1 Solyc02g005200.2.1 Solyc08g008270.2.1 Solyc08g008270.2.1 Solyc10g081470.1.1 Solyc10g081470.1.1 Solyc06g082940.2.1 Solyc06g082940.2.1 Solyc04g005090.2.1 Solyc04g005090.2.1 Solyc06g082950.2.1 Solyc06g082950.2.1
"Solyc08g008270.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g008270.2.1Uncharacterized protein (178 aa)    
Predicted Functional Partners:
Solyc08g079680.2.1
Uncharacterized protein (184 aa)
 
   
  0.675
Solyc08g007580.2.1
Uncharacterized protein (193 aa)
 
   
  0.664
Solyc02g005200.2.1
Uncharacterized protein (365 aa)
   
        0.663
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.587
Solyc06g082950.2.1
Uncharacterized protein (220 aa)
   
        0.538
Solyc06g082940.2.1
Uncharacterized protein (220 aa)
   
        0.538
Solyc04g005090.2.1
Uncharacterized protein (280 aa)
   
        0.538
Solyc07g054820.2.1
Uncharacterized protein (250 aa)
   
        0.517
Solyc05g006440.2.1
Uncharacterized protein (197 aa)
   
        0.510
Solyc10g081470.1.1
Lutescent 2 (547 aa)
   
        0.503
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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