Full Link:
close STRING Website Improvement Campaign
deny allow Over the next 24 hours, we are collecting usage information on the web-interface (learn more).   Do you allow anonymous tracking of your activity ?
STRINGSTRING
Solyc12g056940.1.1 Solyc12g056940.1.1 IPMS3 IPMS3 Solyc04g077240.2.1 Solyc04g077240.2.1 Solyc12g088220.1.1 Solyc12g088220.1.1 Solyc03g043880.2.1 Solyc03g043880.2.1 Solyc09g090900.2.1 Solyc09g090900.2.1 Solyc07g021630.2.1 Solyc07g021630.2.1 Solyc06g060790.1.1 Solyc06g060790.1.1 Solyc03g005730.2.1 Solyc03g005730.2.1 Solyc12g043020.1.1 Solyc12g043020.1.1 Solyc05g053540.2.1 Solyc05g053540.2.1
"IPMS3" - 2-isopropylmalate synthase A-like in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPMS32-isopropylmalate synthase A-like (445 aa)    
Predicted Functional Partners:
Solyc09g090900.2.1
Uncharacterized protein (505 aa)
 
  0.989
Solyc03g005730.2.1
Uncharacterized protein (509 aa)
 
  0.989
Solyc06g060790.1.1
Uncharacterized protein (256 aa)
 
 
  0.979
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.974
Solyc12g043020.1.1
Uncharacterized protein (615 aa)
 
 
  0.974
Solyc05g053540.2.1
Uncharacterized protein (611 aa)
 
 
  0.974
Solyc12g088220.1.1
Branched-chain-amino-acid aminotransferase (380 aa)
   
  0.954
Solyc07g021630.2.1
Branched-chain-amino-acid aminotransferase (383 aa)
   
  0.954
Solyc04g077240.2.1
Uncharacterized protein (274 aa)
   
  0.954
Solyc03g043880.2.1
Branched-chain-amino-acid aminotransferase (418 aa)
   
  0.954
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%)