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TCP17 TCP17 Solyc01g080540.2.1 Solyc01g080540.2.1 Solyc10g086250.1.1 Solyc10g086250.1.1 Solyc08g048370.2.1 Solyc08g048370.2.1 Solyc06g052080.2.1 Solyc06g052080.2.1 Solyc05g015520.2.1 Solyc05g015520.2.1 LOC543910 LOC543910 Solyc04g010050.2.1 Solyc04g010050.2.1 Solyc11g066490.1.1 Solyc11g066490.1.1 Solyc01g009070.2.1 Solyc01g009070.2.1 Solyc03g082710.2.1 Solyc03g082710.2.1
"Solyc08g048370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g048370.2.1Uncharacterized protein (326 aa)    
Predicted Functional Partners:
Solyc05g015520.2.1
Uncharacterized protein (466 aa)
           
  0.916
Solyc01g009070.2.1
GAMyb-like1 (537 aa)
           
  0.822
LOC543910
JERF3 (386 aa)
           
  0.761
Solyc10g086250.1.1
MYB transcription factor AN2 (275 aa)
           
  0.699
Solyc01g080540.2.1
Uncharacterized protein (151 aa)
       
      0.599
TCP17
TCP transcription factor 17 (416 aa)
       
 
  0.460
Solyc11g066490.1.1
Uncharacterized protein (208 aa)
           
  0.410
Solyc06g052080.2.1
Uncharacterized protein (207 aa)
           
  0.410
Solyc04g010050.2.1
Uncharacterized protein (565 aa)
           
  0.410
Solyc03g082710.2.1
Uncharacterized protein (231 aa)
           
  0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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