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LOC543838 LOC543838 Solyc08g068580.2.1 Solyc08g068580.2.1 Solyc10g024370.1.1 Solyc10g024370.1.1 Solyc10g017650.1.1 Solyc10g017650.1.1 PSD2 PSD2 PLDb1 PLDb1 Solyc12g011170.1.1 Solyc12g011170.1.1 Solyc04g082000.2.1 Solyc04g082000.2.1 PLDa2 PLDa2 TPLD TPLD PLDa1 PLDa1
"Solyc08g068580.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g068580.2.1Uncharacterized protein (512 aa)    
Predicted Functional Partners:
LOC543838
Phosphatidylserine decarboxylase (445 aa)
         
    0.916
PSD2
Phosphatidylserine decarboxylase proenzyme 2 ; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine (648 aa)
         
    0.916
Solyc12g011170.1.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (848 aa)
         
  0.902
Solyc10g024370.1.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (839 aa)
         
  0.902
Solyc10g017650.1.1
Uncharacterized protein (1119 aa)
         
  0.902
PLDb1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (846 aa)
         
  0.902
TPLD
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (807 aa)
         
  0.902
PLDa2
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (807 aa)
         
  0.902
PLDa1
Phospholipase D (809 aa)
         
  0.902
Solyc04g082000.2.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (839 aa)
         
  0.902
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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