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Solyc12g049400.1.1 Solyc12g049400.1.1 Solyc03g118540.2.1 Solyc03g118540.2.1 JA3 JA3 Solyc01g103600.2.1 Solyc01g103600.2.1 Solyc08g036660.2.1 Solyc08g036660.2.1 Solyc12g009220.1.1 Solyc12g009220.1.1 Solyc08g036640.2.1 Solyc08g036640.2.1 Solyc07g042170.2.1 Solyc07g042170.2.1 Solyc01g005440.2.1 Solyc01g005440.2.1 Solyc08g036620.2.1 Solyc08g036620.2.1 Solyc06g068930.1.1 Solyc06g068930.1.1
"JA3" - Transcription factor MYC2 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JA3Transcription factor MYC2 (689 aa)    
Predicted Functional Partners:
Solyc03g118540.2.1
Uncharacterized protein (326 aa)
     
  0.988
Solyc01g005440.2.1
Jasmonate ZIM-domain protein 3 (309 aa)
     
  0.985
Solyc12g009220.1.1
Jasmonate ZIM-domain protein 1 (252 aa)
     
  0.984
Solyc01g103600.2.1
Uncharacterized protein (129 aa)
     
  0.983
Solyc07g042170.2.1
Uncharacterized protein (216 aa)
     
  0.973
Solyc06g068930.1.1
Uncharacterized protein (246 aa)
     
 
  0.942
Solyc08g036660.2.1
Uncharacterized protein (127 aa)
       
 
  0.929
Solyc08g036640.2.1
Uncharacterized protein (112 aa)
       
 
  0.929
Solyc08g036620.2.1
Uncharacterized protein (103 aa)
       
 
  0.929
Solyc12g049400.1.1
Uncharacterized protein (200 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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