Full Link:
STRINGSTRING
Solyc07g055850.2.1 Solyc07g055850.2.1 Solyc03g120450.2.1 Solyc03g120450.2.1 Solyc07g042150.2.1 Solyc07g042150.2.1 Solyc11g013170.1.1 Solyc11g013170.1.1 Solyc03g118240.2.1 Solyc03g118240.2.1 Solyc02g090890.2.1 Solyc02g090890.2.1 Solyc08g078040.2.1 Solyc08g078040.2.1 Solyc05g056520.2.1 Solyc05g056520.2.1 PAT PAT Solyc11g044840.1.1 Solyc11g044840.1.1 Solyc06g073280.2.1 Solyc06g073280.2.1
"Solyc08g078040.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g078040.2.1Uncharacterized protein (268 aa)    
Predicted Functional Partners:
Solyc07g055850.2.1
Uncharacterized protein (323 aa)
     
  0.739
Solyc03g118240.2.1
Uncharacterized protein (327 aa)
     
  0.739
Solyc05g056520.2.1
Uncharacterized protein (466 aa)
       
      0.601
Solyc11g044840.1.1
Uncharacterized protein (436 aa)
     
 
  0.592
Solyc11g013170.1.1
Uncharacterized protein (452 aa)
     
 
  0.592
Solyc06g073280.2.1
Uncharacterized protein (461 aa)
     
 
  0.592
PAT
Prephenate aminotransferase (480 aa)
     
 
  0.592
Solyc03g120450.2.1
Uncharacterized protein (394 aa)
     
 
  0.592
Solyc07g042150.2.1
Uncharacterized protein (309 aa)
     
 
  0.538
Solyc02g090890.2.1
Zeaxanthin epoxidase, chloroplastic ; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. Plays an important role in resistance to stresses, seed development and dormancy (669 aa)
   
          0.513
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (2%)