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Solyc03g034170.2.1 Solyc03g034170.2.1 Solyc08g008270.2.1 Solyc08g008270.2.1 VKOR VKOR Solyc08g079110.2.1 Solyc08g079110.2.1 pds pds zds zds Solyc05g010180.2.1 Solyc05g010180.2.1 Solyc01g087500.2.1 Solyc01g087500.2.1
"Solyc08g079110.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g079110.2.1Uncharacterized protein (264 aa)    
Predicted Functional Partners:
VKOR
Vitamin K epoxide reductase (373 aa)
     
 
  0.542
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
           
  0.480
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.473
Solyc08g008270.2.1
Uncharacterized protein (178 aa)
   
        0.452
pds
Phytoene dehydrogenase, chloroplastic/chromoplastic ; This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene (583 aa)
   
        0.445
zds
Zeta-carotene desaturase, chloroplastic/chromoplastic ; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (588 aa)
   
        0.436
Solyc05g010180.2.1
Uncharacterized protein (568 aa)
   
        0.415
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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