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STRINGSTRING
Solyc03g005000.2.1 Solyc03g005000.2.1 Solyc01g094930.2.1 Solyc01g094930.2.1 Solyc09g014890.2.1 Solyc09g014890.2.1 Solyc03g007000.2.1 Solyc03g007000.2.1 Solyc07g065470.2.1 Solyc07g065470.2.1 Solyc11g006340.1.1 Solyc11g006340.1.1
"Solyc09g014890.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g014890.2.1Uncharacterized protein (693 aa)    
Predicted Functional Partners:
Solyc01g094930.2.1
Uncharacterized protein (424 aa)
       
 
  0.901
Solyc07g065470.2.1
Uncharacterized protein (421 aa)
       
      0.497
Solyc11g006340.1.1
Uncharacterized protein (632 aa)
   
   
  0.480
Solyc03g007000.2.1
Uncharacterized protein (400 aa)
       
 
  0.435
Solyc03g005000.2.1
Uncharacterized protein (314 aa)
       
 
  0.435
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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