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Solyc11g005190.1.1 Solyc11g005190.1.1 COP1 COP1 Det1 Det1 Solyc11g011980.1.1 Solyc11g011980.1.1 Solyc12g088340.1.1 Solyc12g088340.1.1 Solyc09g031610.2.1 Solyc09g031610.2.1 DDB1 DDB1 cul4 cul4 Solyc02g070460.2.1 Solyc02g070460.2.1 Solyc11g011150.1.1 Solyc11g011150.1.1 Solyc07g005880.2.1 Solyc07g005880.2.1
"Solyc09g031610.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g031610.2.1Uncharacterized protein (587 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1 ; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 (1095 aa)
       
  0.901
Det1
Light-mediated development protein DET1 ; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 (523 aa)
         
  0.886
Solyc12g088340.1.1
Uncharacterized protein (453 aa)
         
  0.859
COP1
COP1 homolog (677 aa)
         
  0.805
Solyc11g011980.1.1
Uncharacterized protein (672 aa)
         
  0.803
Solyc11g005190.1.1
COP1-like protein (360 aa)
         
    0.800
cul4
Cullin 4 (785 aa)
       
  0.712
Solyc02g070460.2.1
Uncharacterized protein (802 aa)
       
  0.609
Solyc07g005880.2.1
Uncharacterized protein (1012 aa)
         
    0.576
Solyc11g011150.1.1
Uncharacterized protein (928 aa)
         
  0.530
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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