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STRINGSTRING
Solyc02g068720.2.1 Solyc02g068720.2.1 Solyc07g007450.2.1 Solyc07g007450.2.1 Solyc03g117930.2.1 Solyc03g117930.2.1 Solyc12g042440.1.1 Solyc12g042440.1.1 Solyc09g074720.1.1 Solyc09g074720.1.1 Solyc01g058450.2.1 Solyc01g058450.2.1 Solyc03g121580.2.1 Solyc03g121580.2.1 Solyc06g066740.1.1 Solyc06g066740.1.1 Solyc06g053320.2.1 Solyc06g053320.2.1 Solyc11g008320.1.1 Solyc11g008320.1.1 Solyc03g120280.1.1 Solyc03g120280.1.1
"Solyc09g074720.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g074720.1.1Uncharacterized protein (239 aa)    
Predicted Functional Partners:
Solyc06g066740.1.1
Uncharacterized protein (450 aa)
       
      0.602
Solyc03g120280.1.1
Uncharacterized protein (449 aa)
       
      0.602
Solyc11g008320.1.1
Uncharacterized protein (1004 aa)
     
   
  0.522
Solyc06g053320.2.1
Uncharacterized protein (882 aa)
     
   
  0.520
Solyc12g042440.1.1
Uncharacterized protein (547 aa)
     
   
  0.516
Solyc03g117930.2.1
Uncharacterized protein (588 aa)
     
   
  0.516
Solyc02g068720.2.1
Uncharacterized protein (1385 aa)
     
   
  0.514
Solyc01g058450.2.1
Uncharacterized protein (743 aa)
           
  0.493
Solyc03g121580.2.1
Uncharacterized protein (460 aa)
           
  0.453
Solyc07g007450.2.1
Iron-sulfur cluster assembly protein ; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (164 aa)
           
  0.432
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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