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AFRR AFRR Solyc02g091410.2.1 Solyc02g091410.2.1 Solyc09g065610.1.1 Solyc09g065610.1.1 NIP5 NIP5 Solyc07g042510.2.1 Solyc07g042510.2.1 Solyc09g082590.2.1 Solyc09g082590.2.1 MCA MCA Solyc03g043660.2.1 Solyc03g043660.2.1 Solyc01g056910.1.1 Solyc01g056910.1.1 vpe vpe Rcr3 Rcr3
"MCA" - Metacaspase 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCAMetacaspase 1 (416 aa)    
Predicted Functional Partners:
vpe
Vacuolar processing enzyme (460 aa)
     
   
  0.704
NIP5
Nodulin26-like intrinsic protein 51 (295 aa)
           
  0.694
Rcr3
Cysteine protease (345 aa)
           
  0.693
AFRR
Monodehydroascorbate reductase ; Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process (433 aa)
           
  0.476
Solyc03g043660.2.1
Uncharacterized protein (1101 aa)
           
  0.467
Solyc02g091410.2.1
Uncharacterized protein (1110 aa)
           
  0.467
Solyc01g056910.1.1
Uncharacterized protein (72 aa)
           
  0.467
Solyc09g082590.2.1
Uncharacterized protein (242 aa)
           
  0.453
Solyc09g065610.1.1
Uncharacterized protein (58 aa)
           
  0.453
Solyc07g042510.2.1
Uncharacterized protein (243 aa)
           
  0.453
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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