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Solyc09g007440.2.1 Solyc09g007440.2.1 Solyc12g099890.1.1 Solyc12g099890.1.1 Solyc10g080180.1.1 Solyc10g080180.1.1 Solyc02g094590.2.1 Solyc02g094590.2.1 Solyc03g120080.2.1 Solyc03g120080.2.1 DEAD30 DEAD30 DEAD31 DEAD31 Solyc02g069770.2.1 Solyc02g069770.2.1 Solyc05g008040.2.1 Solyc05g008040.2.1 Solyc05g010480.2.1 Solyc05g010480.2.1 Solyc05g008030.1.1 Solyc05g008030.1.1
"DEAD30" - DEAD-box ATP-dependent RNA helicase 36-like in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEAD30DEAD-box ATP-dependent RNA helicase 36-like (488 aa)    
Predicted Functional Partners:
Solyc03g120080.2.1
Uncharacterized protein (666 aa)
     
  0.966
Solyc12g099890.1.1
Uncharacterized protein (812 aa)
     
        0.948
Solyc05g008040.2.1
Uncharacterized protein (665 aa)
     
 
  0.946
Solyc05g008030.1.1
Uncharacterized protein (269 aa)
     
 
  0.946
Solyc02g094590.2.1
Uncharacterized protein (826 aa)
     
 
  0.946
Solyc09g007440.2.1
Uncharacterized protein (546 aa)
   
 
0.937
Solyc05g010480.2.1
Uncharacterized protein (396 aa)
     
 
  0.936
Solyc10g080180.1.1
Uncharacterized protein (499 aa)
     
 
  0.933
DEAD31
DEAD-box ATP-dependent RNA helicase 10-like (439 aa)
   
 
0.926
Solyc02g069770.2.1
Uncharacterized protein (516 aa)
     
 
  0.923
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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