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STRINGSTRING
Solyc05g018780.1.1 Solyc05g018780.1.1 Solyc07g039200.2.1 Solyc07g039200.2.1 Solyc05g025630.1.1 Solyc05g025630.1.1 Solyc10g038030.1.1 Solyc10g038030.1.1 Solyc01g103740.2.1 Solyc01g103740.2.1 Solyc05g023710.2.1 Solyc05g023710.2.1 Solyc04g016380.2.1 Solyc04g016380.2.1 Solyc01g103720.2.1 Solyc01g103720.2.1 Solyc02g081680.2.1 Solyc02g081680.2.1 Solyc05g014070.1.1 Solyc05g014070.1.1 Solyc05g014090.1.1 Solyc05g014090.1.1
"Solyc10g038030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g038030.1.1Uncharacterized protein (110 aa)    
Predicted Functional Partners:
Solyc05g023710.2.1
Uncharacterized protein (638 aa)
     
        0.708
Solyc02g081680.2.1
Uncharacterized protein (750 aa)
     
        0.708
Solyc01g103740.2.1
Uncharacterized protein (504 aa)
     
        0.701
Solyc01g103720.2.1
Uncharacterized protein (99 aa)
     
        0.701
Solyc07g039200.2.1
Uncharacterized protein (462 aa)
     
        0.605
Solyc05g025630.1.1
Uncharacterized protein (463 aa)
     
        0.605
Solyc05g018780.1.1
Uncharacterized protein (379 aa)
     
        0.605
Solyc05g014090.1.1
Uncharacterized protein (397 aa)
     
        0.605
Solyc05g014070.1.1
Uncharacterized protein (118 aa)
     
        0.605
Solyc04g016380.2.1
Uncharacterized protein (312 aa)
     
        0.557
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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