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Solyc09g064500.2.1 Solyc09g064500.2.1 Solyc05g055430.2.1 Solyc05g055430.2.1 LOC544217 LOC544217 Solyc03g114930.2.1 Solyc03g114930.2.1 Solyc01g098640.2.1 Solyc01g098640.2.1 Solyc10g054420.1.1 Solyc10g054420.1.1 Solyc03g116870.2.1 Solyc03g116870.2.1 Solyc05g012700.2.1 Solyc05g012700.2.1 PSBP PSBP Solyc05g026550.2.1 Solyc05g026550.2.1 Solyc01g106090.2.1 Solyc01g106090.2.1
"Solyc10g054420.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g054420.1.1Uncharacterized protein (227 aa)    
Predicted Functional Partners:
Solyc03g114930.2.1
Uncharacterized protein (246 aa)
   
 
0.857
PSBP
Oxygen-evolving enhancer protein 2, chloroplastic ; May be involved in the regulation of photosystem II (258 aa)
   
 
0.853
Solyc05g026550.2.1
Uncharacterized protein (196 aa)
     
   
  0.608
LOC544217
MRNA binding protein (407 aa)
   
        0.589
Solyc01g106090.2.1
Uncharacterized protein (287 aa)
   
        0.545
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
   
   
  0.540
Solyc03g116870.2.1
Uncharacterized protein (463 aa)
     
   
  0.530
Solyc09g064500.2.1
Photosystem II reaction center Psb28 protein (180 aa)
   
        0.514
Solyc05g012700.2.1
Uncharacterized protein (291 aa)
   
        0.503
Solyc05g055430.2.1
Uncharacterized protein (238 aa)
   
        0.497
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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