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LOC543986 LOC543986 ETR1 ETR1 Solyc07g005080.1.1 Solyc07g005080.1.1 CHI9 CHI9 Solyc07g005110.2.1 Solyc07g005110.2.1 Solyc11g008810.1.1 Solyc11g008810.1.1 Never-ripe Never-ripe Solyc07g005100.2.1 Solyc07g005100.2.1 Solyc05g054710.2.1 Solyc05g054710.2.1 Solyc01g081610.2.1 Solyc01g081610.2.1 Solyc07g005090.2.1 Solyc07g005090.2.1
"CHI9" - Basic 30 kDa endochitinase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHI9Basic 30 kDa endochitinase ; Defense against chitin-containing fungal pathogens (322 aa)    
Predicted Functional Partners:
Solyc11g008810.1.1
Beta-hexosaminidase (497 aa)
         
  0.932
Solyc05g054710.2.1
Beta-hexosaminidase 2 (552 aa)
         
  0.932
Solyc01g081610.2.1
Beta-hexosaminidase 1 (575 aa)
         
  0.932
Never-ripe
Ethylene receptor; Ethylene receptor neverripe (635 aa)
         
  0.571
Solyc07g005100.2.1
Uncharacterized protein (376 aa)
 
 
  0.547
Solyc07g005080.1.1
Uncharacterized protein (386 aa)
 
   
  0.527
LOC543986
Glucan endo-1,3-beta-glucosidase A ; Implicated in the defense of plants against pathogens (336 aa)
     
   
  0.526
Solyc07g005110.2.1
Uncharacterized protein (748 aa)
       
  0.517
Solyc07g005090.2.1
Uncharacterized protein (371 aa)
 
   
  0.514
ETR1
Ethylene receptor 1 ; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (754 aa)
         
  0.477
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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