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Solyc10g084310.1.1 Solyc10g084310.1.1 Solyc11g020890.1.1 Solyc11g020890.1.1 Solyc02g070570.2.1 Solyc02g070570.2.1 Solyc03g121370.2.1 Solyc03g121370.2.1 Solyc10g083280.1.1 Solyc10g083280.1.1 rps3 rps3 Solyc12g044730.1.1 Solyc12g044730.1.1 rps8 rps8 Solyc09g010100.2.1 Solyc09g010100.2.1 Solyc04g058060.1.1 Solyc04g058060.1.1 Solyc06g073430.2.1 Solyc06g073430.2.1
"Solyc10g084310.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g084310.1.1Annotation not available (142 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.999
Solyc12g044730.1.1
Uncharacterized protein (131 aa)
   
  0.998
Solyc04g058060.1.1
Uncharacterized protein (436 aa)
   
  0.998
Solyc03g121370.2.1
Uncharacterized protein (129 aa)
   
  0.998
rps8
30S ribosomal protein S8, chloroplastic ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (134 aa)
   
  0.998
Solyc11g020890.1.1
Uncharacterized protein (56 aa)
   
  0.998
Solyc06g073430.2.1
Uncharacterized protein (56 aa)
   
  0.998
Solyc10g083280.1.1
Uncharacterized protein (150 aa)
   
  0.998
Solyc09g010100.2.1
Annotation not available (150 aa)
   
  0.998
Solyc02g070570.2.1
Uncharacterized protein (150 aa)
   
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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