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Solyc11g020290.1.1 Solyc11g020290.1.1 Solyc01g111590.2.1 Solyc01g111590.2.1 Solyc11g005800.1.1 Solyc11g005800.1.1 Solyc07g039330.2.1 Solyc07g039330.2.1 Solyc07g039320.2.1 Solyc07g039320.2.1 pcna pcna Solyc02g063290.2.1 Solyc02g063290.2.1 Solyc02g091110.2.1 Solyc02g091110.2.1 MSI1 MSI1 Solyc05g008480.2.1 Solyc05g008480.2.1 Solyc03g121580.2.1 Solyc03g121580.2.1
"Solyc11g005800.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g005800.1.1Uncharacterized protein (448 aa)    
Predicted Functional Partners:
Solyc05g008480.2.1
Uncharacterized protein (193 aa)
     
 
  0.962
Solyc02g091110.2.1
Uncharacterized protein (193 aa)
     
 
  0.962
Solyc02g063290.2.1
Uncharacterized protein (181 aa)
     
 
  0.962
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
 
  0.951
Solyc11g020290.1.1
Uncharacterized protein (139 aa)
     
 
  0.948
Solyc07g039330.2.1
Uncharacterized protein (377 aa)
     
 
  0.948
Solyc07g039320.2.1
Uncharacterized protein (152 aa)
     
 
  0.948
Solyc03g121580.2.1
Uncharacterized protein (460 aa)
     
 
  0.948
Solyc01g111590.2.1
Uncharacterized protein (403 aa)
     
 
  0.948
MSI1
WD-40 repeat-containing protein MSI1 (424 aa)
     
 
  0.948
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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