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Solyc11g013780.1.1 Solyc11g013780.1.1 Solyc11g056340.1.1 Solyc11g056340.1.1 Solyc12g013580.1.1 Solyc12g013580.1.1 Solyc07g045300.2.1 Solyc07g045300.2.1 Solyc11g008480.1.1 Solyc11g008480.1.1 Solyc01g008070.2.1 Solyc01g008070.2.1 Solyc02g005210.2.1 Solyc02g005210.2.1 Solyc08g007580.2.1 Solyc08g007580.2.1 Solyc08g079680.2.1 Solyc08g079680.2.1 Solyc08g068570.2.1 Solyc08g068570.2.1 Solyc02g092700.2.1 Solyc02g092700.2.1
"Solyc11g008480.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008480.1.1Uncharacterized protein (297 aa)    
Predicted Functional Partners:
Solyc08g007580.2.1
Uncharacterized protein (193 aa)
   
        0.513
Solyc08g079680.2.1
Uncharacterized protein (184 aa)
   
        0.510
Solyc01g008070.2.1
Uncharacterized protein (432 aa)
   
          0.474
Solyc07g045300.2.1
Uncharacterized protein (261 aa)
   
          0.472
Solyc02g005210.2.1
Uncharacterized protein (258 aa)
   
        0.464
Solyc08g068570.2.1
Uncharacterized protein (498 aa)
   
          0.449
Solyc11g013780.1.1
Uncharacterized protein (71 aa)
   
          0.426
Solyc02g092700.2.1
Uncharacterized protein (311 aa)
   
          0.419
Solyc12g013580.1.1
Uncharacterized protein (451 aa)
   
          0.411
Solyc11g056340.1.1
Uncharacterized protein (63 aa)
   
          0.405
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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