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Solyc08g006430.2.1 Solyc08g006430.2.1 Solyc12g009500.1.1 Solyc12g009500.1.1 Solyc03g110910.2.1 Solyc03g110910.2.1 Solyc06g008310.2.1 Solyc06g008310.2.1 Solyc11g010950.1.1 Solyc11g010950.1.1 Solyc04g010090.2.1 Solyc04g010090.2.1 Solyc05g054630.2.1 Solyc05g054630.2.1 Solyc06g036200.1.1 Solyc06g036200.1.1 Solyc02g078300.2.1 Solyc02g078300.2.1 Solyc01g028930.2.1 Solyc01g028930.2.1 Solyc04g078050.2.1 Solyc04g078050.2.1
"Solyc11g010950.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g010950.1.1Uncharacterized protein (360 aa)    
Predicted Functional Partners:
Solyc05g054630.2.1
Elongator complex protein 1 ; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1314 aa)
     
  0.985
Solyc03g110910.2.1
Uncharacterized protein (565 aa)
     
  0.983
Solyc06g008310.2.1
Uncharacterized protein (825 aa)
     
  0.981
Solyc04g078050.2.1
Uncharacterized protein (934 aa)
       
      0.901
Solyc06g036200.1.1
Uncharacterized protein (129 aa)
       
      0.898
Solyc02g078300.2.1
Uncharacterized protein (128 aa)
       
      0.898
Solyc04g010090.2.1
Uncharacterized protein (161 aa)
     
      0.814
Solyc12g009500.1.1
Uncharacterized protein (254 aa)
     
  0.812
Solyc01g028930.2.1
Uncharacterized protein (203 aa)
       
      0.812
Solyc08g006430.2.1
Uncharacterized protein (678 aa)
       
      0.720
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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