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Solyc02g076840.2.1 Solyc02g076840.2.1 Solyc11g013280.1.1 Solyc11g013280.1.1 Solyc11g068610.1.1 Solyc11g068610.1.1 Solyc05g013940.2.1 Solyc05g013940.2.1 Solyc12g007210.1.1 Solyc12g007210.1.1 Solyc01g090450.2.1 Solyc01g090450.2.1 Solyc02g068720.2.1 Solyc02g068720.2.1 Solyc03g043720.2.1 Solyc03g043720.2.1 Solyc02g094320.2.1 Solyc02g094320.2.1 Solyc10g055520.1.1 Solyc10g055520.1.1 Solyc04g024530.2.1 Solyc04g024530.2.1
"Solyc11g013280.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g013280.1.1Uncharacterized protein (915 aa)    
Predicted Functional Partners:
Solyc02g068720.2.1
Uncharacterized protein (1385 aa)
     
  0.993
Solyc03g043720.2.1
Uncharacterized protein (95 aa)
       
  0.978
Solyc02g076840.2.1
Uncharacterized protein (1301 aa)
     
  0.956
Solyc02g094320.2.1
Uncharacterized protein (389 aa)
     
  0.748
Solyc01g090450.2.1
Actin-related protein 2/3 complex subunit 5 ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (132 aa)
         
  0.737
Solyc05g013940.2.1
Uncharacterized protein (429 aa)
     
  0.728
Solyc04g024530.2.1
Uncharacterized protein (429 aa)
     
  0.728
Solyc11g068610.1.1
Uncharacterized protein (328 aa)
         
  0.721
Solyc12g007210.1.1
Uncharacterized protein (211 aa)
     
  0.706
Solyc10g055520.1.1
Uncharacterized protein (159 aa)
     
  0.706
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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