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Solyc06g066740.1.1 Solyc06g066740.1.1 DCL1 DCL1 Solyc11g008520.1.1 Solyc11g008520.1.1 Solyc06g048960.2.1 Solyc06g048960.2.1 Solyc07g005030.2.1 Solyc07g005030.2.1 Solyc03g120280.1.1 Solyc03g120280.1.1 Solyc11g013530.1.1 Solyc11g013530.1.1 Solyc11g013520.1.1 Solyc11g013520.1.1 Solyc09g072580.2.1 Solyc09g072580.2.1 Solyc10g078520.1.1 Solyc10g078520.1.1 Solyc09g090120.2.1 Solyc09g090120.2.1
"Solyc11g013530.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g013530.1.1Uncharacterized protein (1467 aa)    
Predicted Functional Partners:
Solyc11g013520.1.1
Uncharacterized protein (447 aa)
     
  0.895
Solyc11g008520.1.1
Uncharacterized protein (1428 aa)
     
 
  0.640
DCL1
Endoribonuclease Dicer homolog 1 (1888 aa)
     
 
  0.640
Solyc07g005030.2.1
Uncharacterized protein (1536 aa)
     
 
  0.640
Solyc06g048960.2.1
Uncharacterized protein (1399 aa)
     
 
  0.640
Solyc06g066740.1.1
Uncharacterized protein (450 aa)
     
      0.632
Solyc03g120280.1.1
Uncharacterized protein (449 aa)
     
      0.632
Solyc09g090120.2.1
Uncharacterized protein (157 aa)
       
  0.631
Solyc09g072580.2.1
Uncharacterized protein (144 aa)
       
  0.631
Solyc10g078520.1.1
PHD finger protein ING (258 aa)
     
  0.563
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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