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Solyc06g051510.2.1 Solyc06g051510.2.1 Solyc03g098150.2.1 Solyc03g098150.2.1 Solyc04g008720.2.1 Solyc04g008720.2.1 Solyc06g008240.2.1 Solyc06g008240.2.1 Solyc06g072340.2.1 Solyc06g072340.2.1 Solyc11g050800.1.1 Solyc11g050800.1.1 Solyc03g097350.2.1 Solyc03g097350.2.1 Solyc02g078800.2.1 Solyc02g078800.2.1 Solyc02g021360.2.1 Solyc02g021360.2.1 Solyc04g080680.2.1 Solyc04g080680.2.1 Solyc02g036330.2.1 Solyc02g036330.2.1
"Solyc11g050800.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g050800.1.1Uncharacterized protein (315 aa)    
Predicted Functional Partners:
Solyc04g008720.2.1
Katanin p80 WD40 repeat-containing subunit B1 homolog ; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (810 aa)
     
 
  0.920
Solyc02g078800.2.1
Katanin p80 WD40 repeat-containing subunit B1 homolog ; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (1029 aa)
     
 
  0.920
Solyc02g021360.2.1
Katanin p80 WD40 repeat-containing subunit B1 homolog ; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (798 aa)
     
 
  0.920
Solyc06g008240.2.1
Uncharacterized protein (206 aa)
       
      0.497
Solyc02g036330.2.1
Uncharacterized protein (202 aa)
   
     
  0.449
Solyc06g072340.2.1
Uncharacterized protein (1211 aa)
       
 
  0.423
Solyc06g051510.2.1
Uncharacterized protein (519 aa)
       
 
  0.423
Solyc03g098150.2.1
Uncharacterized protein (1165 aa)
       
 
  0.423
Solyc03g097350.2.1
Uncharacterized protein (949 aa)
       
 
  0.423
Solyc04g080680.2.1
Uncharacterized protein (370 aa)
   
          0.418
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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