Full Link:
STRINGSTRING
Solyc12g056940.1.1 Solyc12g056940.1.1 Solyc02g089820.2.1 Solyc02g089820.2.1 Solyc11g062300.1.1 Solyc11g062300.1.1 Solyc04g051370.2.1 Solyc04g051370.2.1 Solyc07g017400.2.1 Solyc07g017400.2.1 Solyc09g018730.2.1 Solyc09g018730.2.1 Solyc04g012040.2.1 Solyc04g012040.2.1 Solyc12g044740.1.1 Solyc12g044740.1.1 Solyc04g079200.2.1 Solyc04g079200.2.1 Solyc06g067990.2.1 Solyc06g067990.2.1 Solyc10g044990.1.1 Solyc10g044990.1.1
"Solyc11g062300.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g062300.1.1Uncharacterized protein (197 aa)    
Predicted Functional Partners:
Solyc06g067990.2.1
Uncharacterized protein (419 aa)
     
 
  0.943
Solyc04g079200.2.1
Uncharacterized protein (312 aa)
     
 
  0.943
Solyc09g018730.2.1
Ubiquitin carboxyl-terminal hydrolase (315 aa)
       
 
  0.943
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
       
      0.937
Solyc07g017400.2.1
Uncharacterized protein (321 aa)
       
 
  0.934
Solyc12g044740.1.1
Uncharacterized protein (483 aa)
     
 
  0.932
Solyc04g051370.2.1
Uncharacterized protein (442 aa)
       
 
  0.928
Solyc04g012040.2.1
Uncharacterized protein (442 aa)
       
 
  0.928
Solyc10g044990.1.1
Uncharacterized protein (153 aa)
       
 
  0.927
Solyc02g089820.2.1
Uncharacterized protein (141 aa)
       
 
  0.927
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (1%)