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Solyc12g099800.1.1 Solyc12g099800.1.1 Solyc04g015450.2.1 Solyc04g015450.2.1 Solyc10g080110.1.1 Solyc10g080110.1.1 Solyc11g021130.1.1 Solyc11g021130.1.1 Solyc11g067040.1.1 Solyc11g067040.1.1 CNX5 CNX5 Solyc03g058880.2.1 Solyc03g058880.2.1 Solyc07g008950.2.1 Solyc07g008950.2.1 Solyc00g050030.1.1 Solyc00g050030.1.1 Solyc05g012090.2.1 Solyc05g012090.2.1 Solyc07g064810.2.1 Solyc07g064810.2.1
"Solyc11g067040.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Databases
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[Homology]
Score
Solyc11g067040.1.1Uncharacterized protein (345 aa)    
Predicted Functional Partners:
Solyc10g080110.1.1
Cytoplasmic tRNA 2-thiolation protein 2 ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (478 aa)
     
  0.944
Solyc07g064810.2.1
Uncharacterized protein (588 aa)
   
 
  0.744
CNX5
Molybdenum cofactor synthesis protein 3 ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is [...] (460 aa)
     
 
  0.602
Solyc00g050030.1.1
Annotation not available (702 aa)
   
   
  0.527
Solyc05g012090.2.1
Dihydropterin pyrophosphokinase-dihydropteroate synthase (512 aa)
   
   
  0.524
Solyc12g099800.1.1
Uncharacterized protein (303 aa)
     
 
  0.521
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
         
  0.519
Solyc04g015450.2.1
Uncharacterized protein (681 aa)
   
 
  0.503
Solyc03g058880.2.1
Uncharacterized protein (660 aa)
   
 
  0.503
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
 
  0.501
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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