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Solyc02g093300.2.1 Solyc02g093300.2.1 Solyc11g067130.1.1 Solyc11g067130.1.1 Solyc07g005020.2.1 Solyc07g005020.2.1 Solyc07g005880.2.1 Solyc07g005880.2.1 Solyc08g082200.2.1 Solyc08g082200.2.1 Solyc11g068480.1.1 Solyc11g068480.1.1 Solyc02g070780.2.1 Solyc02g070780.2.1 Solyc01g110130.2.1 Solyc01g110130.2.1 Solyc05g014540.2.1 Solyc05g014540.2.1 Solyc03g098250.2.1 Solyc03g098250.2.1 Solyc04g045530.2.1 Solyc04g045530.2.1
"Solyc11g067130.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g067130.1.1Uncharacterized protein (660 aa)    
Predicted Functional Partners:
Solyc02g093300.2.1
DNA polymerase alpha catalytic subunit (1561 aa)
     
  0.998
Solyc01g110130.2.1
DNA helicase (831 aa)
     
  0.992
Solyc03g098250.2.1
DNA polymerase II subunit 2 ; Participates in DNA repair and in chromosomal DNA replication (529 aa)
     
  0.990
Solyc05g014540.2.1
DNA polymerase alpha subunit B ; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (617 aa)
     
  0.986
Solyc08g082200.2.1
DNA primase (454 aa)
     
  0.981
Solyc04g045530.2.1
DNA primase large subunit ; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication (459 aa)
     
  0.978
Solyc07g005020.2.1
DNA helicase (737 aa)
     
  0.974
Solyc02g070780.2.1
DNA helicase (787 aa)
     
  0.974
Solyc11g068480.1.1
Uncharacterized protein (175 aa)
     
  0.974
Solyc07g005880.2.1
Uncharacterized protein (1012 aa)
     
  0.973
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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