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SAMT SAMT H1 H1 nii1 nii1 NRT2;3 NRT2;3 nii2 nii2 Solyc01g086650.2.1 Solyc01g086650.2.1 Solyc03g083440.2.1 Solyc03g083440.2.1 Solyc01g009050.2.1 Solyc01g009050.2.1 GLB1 GLB1 NIA NIA Solyc03g063560.2.1 Solyc03g063560.2.1
NRT2 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRT2;3NRT2;3 protein (517 aa)    
Predicted Functional Partners:
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
 
  0.953
nii2
Nitrite reductase (584 aa)
   
 
  0.941
nii1
Nitrite reductase (587 aa)
   
 
  0.941
H1
Histone H1 (271 aa)
           
  0.911
GLB1
PII-like protein (199 aa)
         
  0.724
SAMT
S-adenosyl-L-methionine- salicylic acid carboxyl methyltransferase (361 aa)
           
  0.695
Solyc01g086650.2.1
Uncharacterized protein (376 aa)
   
   
  0.642
Solyc01g009050.2.1
Uncharacterized protein (670 aa)
   
   
  0.637
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
   
  0.559
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
           
  0.536
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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