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PAT PAT Solyc12g088000.1.1 Solyc12g088000.1.1 Solyc10g008200.2.1 Solyc10g008200.2.1 LOC543970 LOC543970 Solyc11g072520.1.1 Solyc11g072520.1.1 Solyc12g096240.1.1 Solyc12g096240.1.1 Solyc04g009350.2.1 Solyc04g009350.2.1 Solyc02g088460.2.1 Solyc02g088460.2.1 Solyc09g011870.1.1 Solyc09g011870.1.1 Solyc07g007590.1.1 Solyc07g007590.1.1 Solyc06g050630.2.1 Solyc06g050630.2.1
"Solyc11g072520.1.1" - Arogenate dehydratase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
Solyc11g072520.1.1Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (393 aa)    
Predicted Functional Partners:
Solyc07g007590.1.1
Uncharacterized protein (377 aa)
 
  0.973
Solyc02g088460.2.1
Uncharacterized protein (316 aa)
     
  0.972
LOC543970
Chorimate mutase (255 aa)
     
  0.971
Solyc06g050630.2.1
Uncharacterized protein (272 aa)
 
 
  0.965
Solyc04g009350.2.1
Uncharacterized protein (414 aa)
   
 
  0.963
Solyc09g011870.1.1
Uncharacterized protein (390 aa)
 
 
  0.963
PAT
Prephenate aminotransferase (480 aa)
 
 
  0.962
Solyc12g096240.1.1
Uncharacterized protein (424 aa)
       
  0.953
Solyc12g088000.1.1
Uncharacterized protein (423 aa)
       
  0.953
Solyc10g008200.2.1
Uncharacterized protein (419 aa)
       
  0.953
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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