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Solyc01g017740.1.1 Solyc01g017740.1.1 Solyc12g008710.1.1 Solyc12g008710.1.1 Solyc12g042920.1.1 Solyc12g042920.1.1 Solyc12g005630.1.1 Solyc12g005630.1.1 Solyc11g068400.1.1 Solyc11g068400.1.1 Solyc08g067020.2.1 Solyc08g067020.2.1 Solyc11g039840.1.1 Solyc11g039840.1.1 Solyc06g067920.2.1 Solyc06g067920.2.1 Solyc02g093900.2.1 Solyc02g093900.2.1 Solyc00g042140.1.1 Solyc00g042140.1.1 Solyc00g042130.1.1 Solyc00g042130.1.1
"Solyc12g008710.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g008710.1.1Uncharacterized protein (1010 aa)    
Predicted Functional Partners:
Solyc00g042140.1.1
Annotation not available (399 aa)
     
  0.992
Solyc00g042130.1.1
Annotation not available (704 aa)
     
 
  0.990
Solyc12g042920.1.1
Uncharacterized protein (324 aa)
     
  0.984
Solyc06g067920.2.1
Uncharacterized protein (320 aa)
     
  0.984
Solyc02g093900.2.1
Uncharacterized protein (269 aa)
     
  0.984
Solyc12g005630.1.1
Cytochrome b6-f complex iron-sulfur subunit (231 aa)
     
  0.980
Solyc11g039840.1.1
Cytochrome b-c1 complex subunit Rieske, mitochondrial ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (265 aa)
     
  0.980
Solyc08g067020.2.1
Cytochrome b-c1 complex subunit 7 ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (123 aa)
     
  0.943
Solyc11g068400.1.1
Uncharacterized protein (72 aa)
     
  0.906
Solyc01g017740.1.1
Uncharacterized protein (97 aa)
     
  0.890
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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