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Solyc04g005180.2.1 Solyc04g005180.2.1 Solyc12g035190.1.1 Solyc12g035190.1.1 CS2 CS2 Solyc06g071550.2.1 Solyc06g071550.2.1 Solyc12g010180.1.1 Solyc12g010180.1.1 LOC543912 LOC543912 CS1 CS1 Solyc02g088460.2.1 Solyc02g088460.2.1 Solyc06g005980.2.1 Solyc06g005980.2.1 Solyc06g006100.2.1 Solyc06g006100.2.1 LOC543970 LOC543970
"Solyc12g010180.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g010180.1.1Uncharacterized protein (283 aa)    
Predicted Functional Partners:
Solyc06g006100.2.1
Uncharacterized protein (587 aa)
  0.998
Solyc06g071550.2.1
Uncharacterized protein (401 aa)
  0.998
Solyc06g005980.2.1
Uncharacterized protein (582 aa)
 
  0.997
LOC543912
Aminodeoxychorismate synthase/glutamine amidotransferase ; Bifunctional enzyme that catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine. In the first step, a glutamine amidotransferase generates ammonia that is channelled between the binding sites of glutamine and chorismate and used along with chorismate in the second step, catalyzed by aminodeoxychorismate synthase, to produce ADC. Required for the synthesis of 4-aminobenzoate (PABA), an important component in tetrahydrofolate biosynthesis. Does not possess ADC lyase activity (902 aa)
0.993
Solyc12g035190.1.1
Uncharacterized protein (386 aa)
  0.990
Solyc04g005180.2.1
Uncharacterized protein (309 aa)
   
  0.973
CS1
Chorismate synthase 1, chloroplastic ; Catalyzes the last common step of the biosynthesis of aromatic amino acids, produced via the shikimic acid pathway (440 aa)
   
 
  0.953
CS2
Chorismate synthase 2, chloroplastic ; Catalyzes the last common step of the biosynthesis of aromatic amino acids, produced via the shikimic acid pathway (431 aa)
   
 
  0.953
LOC543970
Chorimate mutase (255 aa)
   
 
  0.939
Solyc02g088460.2.1
Uncharacterized protein (316 aa)
   
 
  0.939
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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