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PGSC0003DMT400087909 PGSC0003DMT400087909 PGSC0003DMT400030895 PGSC0003DMT400030895 PGSC0003DMT400041850 PGSC0003DMT400041850 PGSC0003DMT400079931 PGSC0003DMT400079931 PGSC0003DMT400069030 PGSC0003DMT400069030 PGSC0003DMT400022684 PGSC0003DMT400022684 CHTB2 CHTB2 PGSC0003DMT400000233 PGSC0003DMT400000233 CHTB4 CHTB4 PGSC0003DMT400030924 PGSC0003DMT400030924 PGSC0003DMT400030923 PGSC0003DMT400030923
"PGSC0003DMT400000233" - Class III chitinase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400000233Class III chitinase (298 aa)    
Predicted Functional Partners:
PGSC0003DMT400041850
Beta-hexosaminidase (531 aa)
         
  0.931
PGSC0003DMT400079931
Beta-hexosaminidase 1 (575 aa)
         
  0.907
CHTB4
Endochitinase 4; Defense against chitin-containing fungal pathogens (332 aa)
           
  0.501
CHTB2
Endochitinase 2; Defense against chitin-containing fungal pathogens (320 aa)
           
  0.501
PGSC0003DMT400069030
Endochitinase 3 (316 aa)
           
  0.501
PGSC0003DMT400022684
Basic 30 kDa endochitinase (323 aa)
           
  0.501
PGSC0003DMT400087909
Receptor-like kinase CHRK1 (435 aa)
           
  0.457
PGSC0003DMT400030924
Receptor-like kinase CHRK1 (372 aa)
           
  0.457
PGSC0003DMT400030923
Chitinase (355 aa)
           
  0.457
PGSC0003DMT400030895
Chitinase (383 aa)
           
  0.457
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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