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PGSC0003DMT400058944 PGSC0003DMT400058944 PGSC0003DMT400052780 PGSC0003DMT400052780 PGSC0003DMT400000301 PGSC0003DMT400000301 PGSC0003DMT400062084 PGSC0003DMT400062084 PGSC0003DMT400067526 PGSC0003DMT400067526 PGSC0003DMT400061049 PGSC0003DMT400061049
"PGSC0003DMT400000301" - Triacylglycerol lipase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
PGSC0003DMT400000301Triacylglycerol lipase (691 aa)    
Predicted Functional Partners:
PGSC0003DMT400061049
Patatin; Lipolytic acyl hydrolase (LAH) (412 aa)
           
  0.403
PGSC0003DMT400058944
Lipase class 3 protein (657 aa)
           
  0.403
PGSC0003DMT400067526
Phospholipase A1 (494 aa)
           
  0.402
PGSC0003DMT400062084
Phospholipase A1 (486 aa)
           
  0.402
PGSC0003DMT400052780
Phospholipase A1 (497 aa)
           
  0.402
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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