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PGSC0003DMT400092532 PGSC0003DMT400092532 PGSC0003DMT400097239 PGSC0003DMT400097239 PGSC0003DMT400094745 PGSC0003DMT400094745 PGSC0003DMT400096238 PGSC0003DMT400096238 PGSC0003DMT400096074 PGSC0003DMT400096074 PGSC0003DMT400000311 PGSC0003DMT400000311 PGSC0003DMT400095953 PGSC0003DMT400095953 PGSC0003DMT400092299 PGSC0003DMT400092299 PGSC0003DMT400093419 PGSC0003DMT400093419 PGSC0003DMT400093573 PGSC0003DMT400093573 PGSC0003DMT400093338 PGSC0003DMT400093338
"PGSC0003DMT400000311" - F-box/LRR-repeat protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400000311F-box/LRR-repeat protein (499 aa)    
Predicted Functional Partners:
PGSC0003DMT400097239
Skp1 (151 aa)
       
  0.875
PGSC0003DMT400096238
Skp1 3 (149 aa)
       
  0.875
PGSC0003DMT400096074
Skp1 3 (172 aa)
       
  0.875
PGSC0003DMT400095953
Skp1 2 (158 aa)
       
  0.875
PGSC0003DMT400094745
SKP1-like 1 (105 aa)
       
  0.875
PGSC0003DMT400093573
SKP1 1 (151 aa)
       
  0.875
PGSC0003DMT400093419
SKP1 1 (151 aa)
       
  0.875
PGSC0003DMT400093338
Skp1 3 (168 aa)
       
  0.875
PGSC0003DMT400092532
SKP1-like 1 (151 aa)
       
  0.875
PGSC0003DMT400092299
Skp1 3 (151 aa)
       
  0.875
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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