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PGSC0003DMT400075264 PGSC0003DMT400075264 PGSC0003DMT400064933 PGSC0003DMT400064933 PGSC0003DMT400072898 PGSC0003DMT400072898 PGSC0003DMT400027267 PGSC0003DMT400027267 PGSC0003DMT400047262 PGSC0003DMT400047262 PGSC0003DMT400041807 PGSC0003DMT400041807 PGSC0003DMT400061098 PGSC0003DMT400061098 PGSC0003DMT400000477 PGSC0003DMT400000477 PGSC0003DMT400032739 PGSC0003DMT400032739 PGSC0003DMT400040161 PGSC0003DMT400040161 PGSC0003DMT400001937 PGSC0003DMT400001937
"PGSC0003DMT400000477" - Cytidine/deoxycytidylate deaminase family protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400000477Cytidine/deoxycytidylate deaminase family protein (439 aa)    
Predicted Functional Partners:
PGSC0003DMT400041807
GTP cyclohydrolase II (552 aa)
 
 
  0.999
PGSC0003DMT400032739
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase (557 aa)
 
 
  0.999
PGSC0003DMT400040161
GTP cyclohydrolase II (520 aa)
 
 
  0.999
PGSC0003DMT400027267
Riboflavin-specific deaminase (389 aa)
 
   
0.966
PGSC0003DMT400075264
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (232 aa)
 
  0.895
PGSC0003DMT400064933
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (232 aa)
 
  0.895
PGSC0003DMT400047262
Riboflavin synthase alpha chain (201 aa)
 
  0.833
PGSC0003DMT400001937
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
         
  0.704
PGSC0003DMT400061098
Phosphomethylpyrimidine kinase (552 aa)
   
   
  0.553
PGSC0003DMT400072898
Dihydropterin pyrophosphokinase-dihydropteroate synthase (509 aa)
         
  0.548
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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