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SXD1 SXD1 PGSC0003DMT400082424 PGSC0003DMT400082424 PGSC0003DMT400002150 PGSC0003DMT400002150 PGSC0003DMT400018933 PGSC0003DMT400018933 PGSC0003DMT400041032 PGSC0003DMT400041032 PGSC0003DMT400000539 PGSC0003DMT400000539 PGSC0003DMT400052282 PGSC0003DMT400052282 PGSC0003DMT400005977 PGSC0003DMT400005977 PGSC0003DMT400001555 PGSC0003DMT400001555 PGSC0003DMT400017062 PGSC0003DMT400017062 PGSC0003DMT400064763 PGSC0003DMT400064763
"PGSC0003DMT400000539" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400000539Conserved gene of unknown function (249 aa)    
Predicted Functional Partners:
PGSC0003DMT400041032
Conserved gene of unknown function (339 aa)
   
     
  0.581
PGSC0003DMT400052282
Conserved gene of unknown function (193 aa)
   
        0.527
PGSC0003DMT400005977
Plastid high chlorophyll fluorescence 136 (393 aa)
   
          0.516
PGSC0003DMT400002150
ATP binding protein (372 aa)
   
          0.513
PGSC0003DMT400082424
PsbP domain-containing protein 2, chloroplastic (242 aa)
   
          0.509
PGSC0003DMT400017062
Glycerophosphoryl diester phosphodiesterase (135 aa)
   
          0.488
PGSC0003DMT400064763
Conserved gene of unknown function (154 aa)
   
          0.469
SXD1
Tocopherol cyclase (501 aa)
   
        0.443
PGSC0003DMT400018933
Conserved gene of unknown function (213 aa)
   
        0.441
PGSC0003DMT400001555
DNA mismatch repair muts family protein (197 aa)
   
          0.438
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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