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PGSC0003DMT400060963 PGSC0003DMT400060963 PGSC0003DMT400006585 PGSC0003DMT400006585 PGSC0003DMT400083452 PGSC0003DMT400083452 PGSC0003DMT400047444 PGSC0003DMT400047444 PGSC0003DMT400040024 PGSC0003DMT400040024 PGSC0003DMT400063189 PGSC0003DMT400063189 PGSC0003DMT400038358 PGSC0003DMT400038358 PGSC0003DMT400000543 PGSC0003DMT400000543 PGSC0003DMT400067208 PGSC0003DMT400067208 PGSC0003DMT400002830 PGSC0003DMT400002830 PGSC0003DMT400037253 PGSC0003DMT400037253
"PGSC0003DMT400000543" - Bmru protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400000543Bmru protein (347 aa)    
Predicted Functional Partners:
PGSC0003DMT400063189
Cell division cycle (544 aa)
     
  0.919
PGSC0003DMT400040024
Anaphase-promoting complex; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
       
  0.913
PGSC0003DMT400047444
Anaphase promoting complex protein (884 aa)
     
    0.912
PGSC0003DMT400038358
FAD-binding domain-containing protein (107 aa)
       
 
  0.899
PGSC0003DMT400083452
Cdc27B (111 aa)
     
  0.705
PGSC0003DMT400006585
Cdc27B (766 aa)
     
  0.705
PGSC0003DMT400060963
Polychome, UV-B-insensitive 4 (255 aa)
       
 
  0.692
PGSC0003DMT400002830
Sphingosine-1-phosphate phosphohydrolase (407 aa)
     
 
  0.661
PGSC0003DMT400067208
Uracil phosphoribosyltransferase (485 aa)
     
 
  0.609
PGSC0003DMT400037253
Uridine kinase (467 aa)
     
 
  0.609
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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