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PGSC0003DMT400011984 PGSC0003DMT400011984 PGSC0003DMT400004068 PGSC0003DMT400004068 PGSC0003DMT400000568 PGSC0003DMT400000568 PGSC0003DMT400055636 PGSC0003DMT400055636 PGSC0003DMT400039081 PGSC0003DMT400039081 PGSC0003DMT400058944 PGSC0003DMT400058944
"PGSC0003DMT400000568" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400000568Conserved gene of unknown function (411 aa)    
Predicted Functional Partners:
PGSC0003DMT400055636
U1 small nuclear ribonucleoprotein 70 kD (352 aa)
           
  0.515
PGSC0003DMT400039081
Conserved gene of unknown function (721 aa)
           
  0.515
PGSC0003DMT400011984
Conserved gene of unknown function (321 aa)
           
  0.515
PGSC0003DMT400004068
RNA binding protein (452 aa)
           
  0.515
PGSC0003DMT400058944
Lipase class 3 protein (657 aa)
     
   
  0.408
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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