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PGSC0003DMT400072898 PGSC0003DMT400072898 PGSC0003DMT400061098 PGSC0003DMT400061098 PGSC0003DMT400012014 PGSC0003DMT400012014 PGSC0003DMT400070106 PGSC0003DMT400070106 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400000682 PGSC0003DMT400000682 PGSC0003DMT400060907 PGSC0003DMT400060907 PGSC0003DMT400059968 PGSC0003DMT400059968 PGSC0003DMT400017925 PGSC0003DMT400017925 PGSC0003DMT400037253 PGSC0003DMT400037253 PGSC0003DMT400067208 PGSC0003DMT400067208
"PGSC0003DMT400000682" - ATP binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400000682ATP binding protein (520 aa)    
Predicted Functional Partners:
PGSC0003DMT400072898
Dihydropterin pyrophosphokinase-dihydropteroate synthase (509 aa)
   
   
  0.754
PGSC0003DMT400059968
Phenylalanyl-tRNA synthetase (434 aa)
   
 
  0.748
PGSC0003DMT400061098
Phosphomethylpyrimidine kinase (552 aa)
         
  0.697
PGSC0003DMT400067208
Uracil phosphoribosyltransferase (485 aa)
   
 
  0.656
PGSC0003DMT400037253
Uridine kinase (467 aa)
   
 
  0.656
PGSC0003DMT400017925
Uridine kinase (357 aa)
   
 
  0.656
PGSC0003DMT400012014
Parvulin-type peptidyl prolyl cis/trans isomerase (236 aa)
   
   
  0.563
PGSC0003DMT400070106
Thioredoxin reductase (231 aa)
     
 
  0.551
PGSC0003DMT400060907
Thioredoxin reductase (543 aa)
     
 
  0.551
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
   
   
  0.550
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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