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PGSC0003DMT400027956 PGSC0003DMT400027956 PGSC0003DMT400025666 PGSC0003DMT400025666 PGSC0003DMT400000858 PGSC0003DMT400000858 PGSC0003DMT400052197 PGSC0003DMT400052197
"PGSC0003DMT400000858" - GTP-ase activating protein for Arf containing protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PGSC0003DMT400000858GTP-ase activating protein for Arf containing protein (631 aa)    
Predicted Functional Partners:
PGSC0003DMT400025666
Calcium ion binding protein (162 aa)
     
  0.644
PGSC0003DMT400052197
Actin (399 aa)
     
 
  0.496
PGSC0003DMT400027956
Conserved gene of unknown function (431 aa)
         
  0.494
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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